The Common Base contains certain components that are common to multiple Windchill solutions (Windchill PDMLink, Windchill CAPA, Windchill Integrations for Embedded Software, etc). In 10.1, the common base was included in the Windchill PDMLink install media. It was also available as a separate download, but was only required when installing a solution that depends on the CommonPDM without also installing PDMLink. In 10.2, the common base has been removed from the PDMLink install media and is now a separate download for all solutions that depend on CommonPDM (including PDMLink).
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